Publications

* For most updated publication list, please see this Google Scholar link.

Anatomy-Specific Classification Model Using Label-free FLIm to Aid Intraoperative Surgical Guidance of Head and Neck Cancer

MA Hassan, BW Weyers, J Bec, F Fereidouni, J Qi, D Gui, AF Bewley, ...

IEEE Transactions on Biomedical Engineering

 2023

Super-resolution reconstruction of γ-ray CT images for PET-enabled dual-energy CT imaging

Y Zhu, BA Spencer, Z Xie, EK Leung, R Bayerlein, N Omidvari, SR Cherry, ...

Medical Imaging 2023: Physics of Medical Imaging 12463, 291-296

 2023

Anatomy-specific classification models using FLIm for head & neck cancer surgical guidance

M Hassan, BW Weyers, J Bec, F Fereidouni, J Qi, D Gui, AC Birkeland, ...

Imaging, Therapeutics, and Advanced Technology in Head and Neck Surgery and …

 2023

AI-Based Automated Lipomatous Tumor Segmentation in MR Images: Ensemble Solution to Heterogeneous Data

CC Liu, YG Abdelhafez, SP Yap, F Acquafredda, S Schirò, AL Wong, ...

Journal of Digital Imaging, 1-11

 2023

A conformal TOF–DOI Prism‐PET prototype scanner for high‐resolution quantitative neuroimaging

X Zeng, Z Wang, W Tan, E Petersen, X Cao, A LaBella, A Boccia, ...

Medical Physics

22023

Neural KEM: A kernel method with deep coefficient prior for PET image reconstruction

S Li, K Gong, RD Badawi, EJ Kim, J Qi, G Wang

IEEE transactions on medical imaging 42 (3), 785-796

32022

Ultrafast tracer imaging for positron emission tomography

X Zhang, J Qi, SR Cherry, RD Badawi, G Wang

US Patent App. 17/619,471

 2022

Lutetium background radiation in total-body PET—A simulation study on opportunities and challenges in PET attenuation correction

N Omidvari, L Cheng, EK Leung, YG Abdelhafez, RD Badawi, T Ma, J Qi, ...

Frontiers in Nuclear Medicine 2, 963067

12022

Total-body PET multiparametric imaging of cancer using a voxelwise strategy of compartmental modeling

G Wang, L Nardo, M Parikh, YG Abdelhafez, E Li, BA Spencer, J Qi, ...

Journal of Nuclear Medicine 63 (8), 1274-1281

292022

Relating 18F-FDG image signal-to-noise ratio to time-of-flight noise-equivalent count rate in total-body PET using the uEXPLORER scanner

EK Leung, YG Abdelhafez, E Berg, Z Xie, X Zhang, R Bayerlein, ...

Physics in Medicine & Biology 67 (12), 125007

 2022

Stochastic sampling for on-the-fly system matrix calculation in DOI enabled high-resolution brain PET imaging

T Li, X Zhang, EK Leung, J Qi

Journal of Nuclear Medicine 63 (supplement 2), 2397-2397

 2022

SPLIT: Statistical Positronium Lifetime Image reconstruction via events sorting by Thresholds

B Huang, T Li, X Zhang, Z Xie, J Qi

Journal of Nuclear Medicine 63 (supplement 2), 2514-2514

 2022

Kernel SIME: simultaneous estimation of blood input function using a kernel method and its evaluation with total-body PET

Y Zhu, Y Wang, Q Tran, R Badawi, S Cherry, J Qi, S Abbaszadeh, G Wang

Journal of Nuclear Medicine 63 (supplement 2), 2600-2600

 2022

Real-time Motion Tracking for Total-body Molecular Imaging

X Zhang, Z Xie, Z Cheng, Y Duan, T Xu, C Li, H Li, T Jones, S Cherry, ...

Journal of Nuclear Medicine 63 (supplement 2), 2601-2601

 2022

Unsupervised PET Image Denoising using Double Over-parameterization

T Li, Z Xie, W Qi, E ASMA, J Qi

Journal of Nuclear Medicine 63 (supplement 2), 3239-3239

 2022

Positronium lifetime image reconstruction for TOF PET

J Qi, B Huang

IEEE Transactions on Medical Imaging 41 (10), 2848-2855

82022

Head and neck synthetic CT generated from ultra‐low‐dose cone‐beam CT following Image Gently Protocol using deep neural network

N Yuan, S Rao, Q Chen, L Sensoy, J Qi, Y Rong

Medical Physics 49 (5), 3263-3277

72022

Sparse-view CT spatial resolution enhancement via a densely connected convolutional neural network with spatial guidance

N Yuan, J Zhou, J Qi

Medical Imaging 2022: Physics of Medical Imaging 12031, 606-610

 2022

Performance evaluation of dual-ended readout PET detectors based on BGO arrays with different reflector arrangements

J Du, Q Wang, CC Liu, J Qi, SR Cherry

Physics in Medicine & Biology 66 (21), 215001

22021

Direct reconstruction of linear parametric images from dynamic PET using nonlocal deep image prior

K Gong, C Catana, J Qi, Q Li

IEEE Transactions on Medical Imaging 41 (3), 680-689

172021

Using neural networks to estimate motion vectors for motion corrected pet image reconstruction

J Qi, LI Tiantian, XIE Zhaoheng, W Qi, L Yang, C Chan, A Evren

US Patent App. 17/180,182

 2021

Method and system for denoising ct images using a neural network

J Qi, N Yuan, J Zhou

US Patent App. 16/938,463

12021

Anatomically aided PET image reconstruction using deep neural networks

Z Xie, T Li, X Zhang, W Qi, E Asma, J Qi

Medical Physics 48 (9), 5244-5258

92021

4D Total-Body PET Parametric Imaging with Cardiac Modulation

X Zhang, Z Xie, Y Zuo, H Shi, G Wang, S Cherry, R Badawi, J Qi

Journal of Nuclear Medicine 62 (supplement 1), 54-54

 2021

Design of the NeuroEXPLORER, a next-generation ultra-high performance human brain PET imager

R Carson, E Berg, R Badawi, S Cherry, J Du, T Feng, K Fontaine, ...

Journal of Nuclear Medicine 62 (supplement 1), 1120-1120

72021

Total-body parametric reconstruction with deep learning-based data-driven motion compensation

T Li, X Zhang, Z Xie, H Shi, S Cherry, R Badawi, J Qi

Journal of Nuclear Medicine 62 (supplement 1), 60-60

12021

Simultaneous imaging of cancer and heart using total-body multiparametric PET on EXPLORER

G Wang, L Nardo, M Parikh, P Lara, B Spencer, J Qi, C Foster, S Cherry, ...

Journal of Nuclear Medicine 62 (supplement 1), 1447-1447

12021

Tomographic imaging with Compton PET modules: ideal case and first implementation

P Peng, M Zhang, N Zeraatkar, J Qi, SR Cherry

Journal of Instrumentation 16 (04), T04007

22021

H2RSPET: a 0.5 mm resolution high-sensitivity small-animal PET scanner, a simulation study

Y Lai, Q Wang, S Zhou, Z Xie, J Qi, SR Cherry, M Jin, Y Chi, J Du

Physics in Medicine & Biology 66 (6), 065016

112021

Clinical enhancement in AI-based post-processed fast-scan low-dose CBCT for head and neck adaptive radiotherapy

W Chen, Y Li, N Yuan, J Qi, BA Dyer, L Sensoy, SH Benedict, L Shang, ...

Frontiers in Artificial Intelligence 3, 614384

62021

3D/4D reconstruction and quantitative total body imaging

J Qi, S Matej, G Wang, X Zhang

PET clinics 16 (1), 41-54

52021

Half2Half: deep neural network based CT image denoising without independent reference data

N Yuan, J Zhou, J Qi

Physics in Medicine & Biology 65 (21), 215020

302020

A Fast Local Gating Method for TOF-PET

T Feng, G Yang, X Zhang, E Berg, H Liu, Y Lv, J Qi, SR Cherry, ...

2020 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC …

 2020

Penalized maximum-likelihood reconstruction for improving limited-angle artifacts in a dedicated head and neck PET system

H Zhang, Y Wang, J Qi, S Abbaszadeh

Physics in Medicine & Biology 65 (16), 165016

92020

Motion correction of respiratory-gated PET images using deep learning based image registration framework

T Li, M Zhang, W Qi, E Asma, J Qi

Physics in Medicine & Biology 65 (15), 155003

412020

Generative adversarial network based regularized image reconstruction for PET

Z Xie, R Baikejiang, T Li, X Zhang, K Gong, M Zhang, W Qi, E Asma, J Qi

Physics in Medicine & Biology 65 (12), 125016

332020

Ultralow-dose CT imaging with deep learning noise reduction on EXPLORER total-body PET/CT scanner

J Ahlquist, Y Abdelhafez, L Nardo, R Badawi, J Qi, G Wang

Journal of Nuclear Medicine 61 (supplement 1), 3044-3044

12020

Deep learning based joint PET image reconstruction and motion estimation

T Li, M Zhang, W Qi, E Asma, J Qi

Journal of Nuclear Medicine 61 (supplement 1), 11-11

52020

Comparison of linear and non-linear total-body PET parametric imaging

X Zhang, Z Xie, G Wang, J Schmall, H Shi, S Cherry, R Badawi, J Qi

Journal of Nuclear Medicine 61 (supplement 1), 206-206

12020

Total-body dynamic PET of metastatic cancer: first patient results

G Wang, M Parikh, L Nardo, Y Zuo, Y Abdelhafez, J Qi, T Jones, P Price, ...

Journal of Nuclear Medicine 61 (supplement 1), 208-208

92020

Anatomy-guided PET image reconstruction with deep neural network

Z Xie, J Qi

Journal of Nuclear Medicine 61 (supplement 1), 8-8

12020

Maximum likelihood activity and attenuation estimation using both emission and transmission data with application to utilization of Lu‐176 background radiation in TOF PET

L Cheng, T Ma, X Zhang, Q Peng, Y Liu, J Qi

Medical Physics 47 (3), 1067-1082

52020

Subsecond total-body imaging using ultrasensitive positron emission tomography

X Zhang, SR Cherry, Z Xie, H Shi, RD Badawi, J Qi

Proceedings of the National Academy of Sciences 117 (5), 2265-2267

892020

Total-body dynamic reconstruction and parametric imaging on the uEXPLORER

X Zhang, Z Xie, E Berg, MS Judenhofer, W Liu, T Xu, Y Ding, Y Lv, Y Dong, ...

Journal of Nuclear Medicine 61 (2), 285-291

1282020

Convolutional neural network enhancement of fast-scan low-dose cone-beam CT images for head and neck radiotherapy

N Yuan, B Dyer, S Rao, Q Chen, S Benedict, L Shang, Y Kang, J Qi, ...

Physics in Medicine & Biology 65 (3), 035003

402020

Design and evaluation of gapless curved scintillator arrays for simultaneous high-resolution and high-sensitivity brain PET

J Du, X Bai, CC Liu, J Qi, SR Cherry

Physics in Medicine & Biology 64 (23), 235004

172019

Data-driven Estimation of Crystal Efficiencies using Single Events

T Feng, AR Selfridge, L He, EKS Leung, Y Liu, B Spencer, J Schmall, J Qi, ...

2019 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC …

 2019

Prototype small-animal PET-CT imaging system for image-guided radiation therapy

E Mikhaylova, J Brooks, DM Zuro, F Nouizi, M Kujawski, SS Madabushi, ...

IEEE Access 7, 143207-143216

82019

Machine learning in PET: from photon detection to quantitative image reconstruction

K Gong, E Berg, SR Cherry, J Qi

Proceedings of the IEEE 108 (1), 51-68

872019

Low-dose CT image denoising without high-dose reference images

N Yuan, J Zhou, J Qi

15th International Meeting on Fully Three-Dimensional Image Reconstruction …

132019

Direct patlak reconstruction from dynamic PET using unsupervised deep learning

K Gong, C Catana, J Qi, Q Li

15th International meeting on fully three-dimensional image reconstruction …

132019

Higher SNR PET image prediction using a deep learning model and MRI image

CC Liu, J Qi

Physics in Medicine & Biology 64 (11), 115004

632019

Total-body parametric imaging using kernel and direct reconstruction on the uEXPLORER

X Zhang, Z Xie, E Berg, M Judenhofer, W Liu, Y Lv, Y Ding, LV Xinyu, T Xu, ...

Journal of Nuclear Medicine 60 (supplement 1), 456-456

102019

Direct Patlak Reconstruction for Low-Dose Dynamic PET Using Unsupervised Deep Learning

K Gong, C Catana, J Qi, Q Li

Journal of Nuclear Medicine 60 (supplement 1), 575-575

22019

Low-dose CT count-domain denoising via convolutional neural network with filter loss

N Yuan, J Zhou, K Gong, J Qi

Medical Imaging 2019: Physics of Medical Imaging 10948, 186-193

42019

Machine (deep) learning methods for image processing and radiomics

M Hatt, C Parmar, J Qi, I El Naqa

IEEE Transactions on Radiation and Plasma Medical Sciences 3 (2), 104-108

1092019

Image-based point-spread-function modelling in time-of-flight positron-emission-tomography iterative list-mode reconstruction

J Qi, J Zhou, YE Hongwei, W Wang

US Patent 10,216,701

22019

Apparatus and method for hybrid pre-log and post-log iterative image reconstruction for computed tomography

J Qi, G Wang, W Wang, J Zhou, Z Yu

US Patent 10,213,176

 2019

An efficient approach to perform MR-assisted PET data optimization in simultaneous PET/MR neuroimaging studies

KT Chen, S Salcedo, K Gong, DB Chonde, D Izquierdo-Garcia, A Drzezga, ...

Journal of Nuclear Medicine 60 (2), 272-278

182019

PET image reconstruction using deep image prior

K Gong, C Catana, J Qi, Q Li

IEEE transactions on medical imaging 38 (7), 1655-1665

1842018

PET image denoising using a deep neural network through fine tuning

K Gong, J Guan, CC Liu, J Qi

IEEE Transactions on Radiation and Plasma Medical Sciences 3 (2), 153-161

1792018

Iterative PET image reconstruction using convolutional neural network representation

K Gong, J Guan, K Kim, X Zhang, J Yang, Y Seo, G El Fakhri, J Qi, Q Li

IEEE transactions on medical imaging 38 (3), 675-685

2342018

Relative Patlak plot for dynamic PET parametric imaging without the need for early-time input function

Y Zuo, J Qi, G Wang

Physics in Medicine & Biology 63 (16), 165004

152018

Learning personalized representation for inverse problems in medical imaging using deep neural network

K Gong, K Kim, J Cui, N Guo, C Catana, J Qi, Q Li

arXiv preprint arXiv:1807.01759

62018

Theoretical study of the benefit of long axial field-of-view PET on region of interest quantification

X Zhang, RD Badawi, SR Cherry, J Qi

Physics in Medicine & Biology 63 (13), 135010

182018

Corrections to" Direct Patlak Reconstruction From Dynamic PET Data Using the Kernel Method With MRI Information Based on Structural Similarity".

K Gong, J Cheng-Liao, G Wang, KT Chen, C Catana, J Qi

IEEE Trans. Medical Imaging 37 (8), 1955

 2018

Development and evaluation of mini-EXPLORER: a long axial field-of-view PET scanner for nonhuman primate imaging

E Berg, X Zhang, J Bec, MS Judenhofer, B Patel, Q Peng, M Kapusta, ...

Journal of Nuclear Medicine 59 (6), 993-998

472018

Progress on the EXPLORER project: towards a total body PET scanner for human imaging

R Badawi, W Liu, E Berg, Y Lv, T Xu, S An, Y Dong, X Zhang, ...

Journal of Nuclear Medicine 59 (supplement 1), 223-223

102018

Development and evaluation of penalized image reconstruction for the total-body EXPLORER

X Zhang, R Badawi, S Cherry, J Qi

Journal of Nuclear Medicine 59 (supplement 1), 1773-1773

22018

Post-doctoral Scholar

Y Zuo, J Qi, G Wang

Journal of Nuclear Medicine 59 (supplement 1), 1729-1729

 2018

Evaluation of Hamamatsu PET imaging modules for dedicated TOF-capable scanners

A Stolin, R Raylman, G Jaliparthi, J Qi, K Gong, S Dolinsky, S Majewski

Journal of Nuclear Medicine 59 (supplement 1), 1764-1764

 2018

Lesion detection and quantification performance of the Tachyon-I time-of-flight PET scanner: phantom and human studies

X Zhang, Q Peng, J Zhou, JS Huber, WW Moses, J Qi

Physics in Medicine & Biology 63 (6), 065010

62018

Functionally distinct and selectively phosphorylated GPCR subpopulations co-exist in a single cell

A Shen, M Nieves-Cintron, Y Deng, Q Shi, D Chowdhury, J Qi, JW Hell, ...

Nature communications 9 (1), 1050

322018

Total-body PET: maximizing sensitivity to create new opportunities for clinical research and patient care

SR Cherry, T Jones, JS Karp, J Qi, WW Moses, RD Badawi

Journal of Nuclear Medicine 59 (1), 3-12

5022018

Image Reconstruction for 3D PET

J Qi

Medical Imaging: Technology and Applications, 429

 2017

Direct patlak reconstruction from dynamic PET data using the kernel method with MRI information based on structural similarity

K Gong, J Cheng-Liao, G Wang, KT Chen, C Catana, J Qi

IEEE transactions on medical imaging 37 (4), 955-965

792017

PET image denoising using deep neural network

K Gong, J Guan, CC Liu, J Qi

2017 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC …

62017

Kernel-based anatomically-aided diffuse optical tomography reconstruction

R Baikejiang, W Zhang, D Zhu, AM Hernandez, SA Shakeri, G Wang, J Qi, ...

Biomedical Physics & Engineering Express 3 (5), 055002

72017

Hybrid pre-log and post-log image reconstruction for computed tomography

G Wang, J Zhou, Z Yu, W Wang, J Qi

IEEE transactions on medical imaging 36 (12), 2457-2465

112017

Open-field mouse brain PET: design optimisation and detector characterisation

AZ Kyme, MS Judenhofer, K Gong, J Bec, A Selfridge, J Du, J Qi, ...

Physics in Medicine & Biology 62 (15), 6207

132017

Sinogram blurring matrix estimation from point sources measurements with rank-one approximation for fully 3-D PET

K Gong, J Zhou, M Tohme, M Judenhofer, Y Yang, J Qi

IEEE transactions on medical imaging 36 (10), 2179-2188

212017

Regularization parameter selection for penalized-likelihood list-mode image reconstruction in PET

M Zhang, J Zhou, X Niu, E Asma, W Wang, J Qi

Physics in Medicine & Biology 62 (12), 5114

72017

Association of Image-derived Blood Input Function with Patient Characteristics in Dynamic FDG-PET: A Pilot Study

B Spencer, A Sahabi, A Ferrero, M Rusnak, H Hunt, A Lee, S Sarkar, ...

Journal of Nuclear Medicine 58 (supplement 1), 1315-1315

 2017

First pre-clinical study of total-body dynamic PET imaging using the mini-EXPLORER scanner

X Zhang, E Berg, J Bec, M Judenhofer, M Kapusta, M Schmand, M Casey, ...

Journal of Nuclear Medicine 58 (supplement 1), 394-394

62017

Preliminary Results of a Depth-of-Interaction based PET System with Dual Ended Readout for Combined Breast PET/CT Imaging

M Judenhofer, MGB Sumanasena, K Gong, Q Peng, G Burkett, B Spencer, ...

Journal of Nuclear Medicine 58 (supplement 1), 223-223

 2017

Modular positron emission tomography kit

RD Badawi, S Cherry, F Godinez, J Poon, M Judenhofer, J Qi, ...

US Patent 9,632,187

222017

An efficient approach to obtain optimized metabolic PET and morphological MR data in dementia patients (P4. 096)

KT Chen, S Salcedo, J Qi, B Dickerson, C Catana

Neurology 88 (16 Supplement)

 2017

Dynamic PET image reconstruction for parametric imaging using the HYPR kernel method

B Spencer, J Qi, RD Badawi, G Wang

Medical Imaging 2017: Physics of Medical Imaging 10132, 1265-1271

212017

Nonlinear PET parametric image reconstruction with MRI information using kernel method

K Gong, G Wang, KT Chen, C Catana, J Qi

Medical Imaging 2017: Physics of Medical Imaging 10132, 354-360

62017

Quantitative image reconstruction for total-body PET imaging using the 2-meter long EXPLORER scanner

X Zhang, J Zhou, SR Cherry, RD Badawi, J Qi

Physics in Medicine & Biology 62 (6), 2465

1222017

Response to “Gaussian or Poisson noise?”

D Ma, J Liu, J Qi, L Marcu

Physics in medicine and biology 62 (4), 1637

 2017

Reply to Comment:‘A novel method for fast and robust estimation of fluorescence decay dynamics using constrained least-square deconvolution with Laguerre expansion’

D Ma, J Liu, J Qi, L Marcu

Physics in Medicine & Biology 62 (4), 1637

42017

Theoretical study of benefit of long axial field-of-view PET: impact on quantification performance

X Zhang, RD Badawi, SR Cherry, J Qi

The 14th International Meeting on Fully Three-Dimensional Image …

12017

New Frontier in Neuroimaging: Imaging Upright Moving Subjects With a Wearable, Low-Dose PET Scanner

J Brefczynski-Lewis, C Bauer, G Marano, K Gong, J Qi, P Kinahan, ...

NEUROPSYCHOPHARMACOLOGY 41, S201-S202

 2016

Development of tachyon time-of-flight PET cameras

Q Peng, W Moses, X Zhang, J Qi, Z Zhao, Q Huang, Y Zhu, T Sui, M Yang, ...

2016 IEEE Nuclear Science Symposium, Medical Imaging Conference and Room …

32016

Anatomically-aided PET reconstruction using the kernel method

W Hutchcroft, G Wang, KT Chen, C Catana, J Qi

Physics in Medicine & Biology 61 (18), 6668

842016

A prototype high-resolution small-animal PET scanner dedicated to mouse brain imaging

Y Yang, J Bec, J Zhou, M Zhang, MS Judenhofer, X Bai, K Di, Y Wu, ...

Journal of Nuclear Medicine 57 (7), 1130-1135

992016

Improving depth, energy and timing estimation in PET detectors with deconvolution and maximum likelihood pulse shape discrimination

E Berg, E Roncali, W Hutchcroft, J Qi, SR Cherry

IEEE transactions on medical imaging 35 (11), 2436-2446

82016

Designing a compact high performance brain PET scanner—simulation study

K Gong, S Majewski, PE Kinahan, RL Harrison, BF Elston, R Manjeshwar, ...

Physics in Medicine & Biology 61 (10), 3681

672016

Essentials of in vivo biomedical imaging

SR Cherry, RD Badawi, J Qi

CRC Press

152016

On the assessment of spatial resolution of PET systems with iterative image reconstruction

K Gong, SR Cherry, J Qi

Physics in Medicine & Biology 61 (5), N193

782016

Efficient system modeling for a small animal PET scanner with tapered DOI detectors

M Zhang, J Zhou, Y Yang, M Rodríguez-Villafuerte, J Qi

Physics in Medicine & Biology 61 (2), 461

92015

Theoretical analysis of penalized maximum-likelihood Patlak parametric image reconstruction in dynamic PET for lesion detection

L Yang, G Wang, J Qi

IEEE transactions on medical imaging 35 (4), 947-956

72015

Open-field mouse brain PET: Design considerations and detector development

AZ Kyme, K Gong, MS Judenhofer, J Bec, J Du, J Qi, SR Cherry, ...

2015 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC …

 2015

Simulation study for designing a compact brain PET scanner

K Gong, S Majewski, PE Kinahan, RL Harrison, BF Elston, R Manjeshwar, ...

2015 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC …

72015

A monotonie image-space algorithm for joint PET image reconstruction and motion estimation

G Wang, J Qi

2015 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC …

52015

Design considerations for AMPET: the ambulatory micro-dose, wearable PET brain imager

P Kinahan, S Majewski, B Elston, R Harrison, J Qi, R Manjeshwar, ...

Journal of Nuclear Medicine 56 (supplement 3), 1540-1540

102015

Theoretical analysis of lesion detectability in penalized maximum-likelihood patlak parametric image reconstruction using dynamic PET

L Yang, G Wang, J Qi

2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI), 1188-1191

22015

Accelerated direct reconstruction of PET parametric images using augmented Lagrangian optimization

G Wang, J Qi

2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI), 1200-1203

32015

Performance of the tachyon time-of-flight PET camera

Q Peng, WS Choong, C Vu, JS Huber, M Janecek, D Wilson, ...

IEEE transactions on nuclear science 62 (1), 111-119

92015

Validation of the SimSET simulation package for modeling the Siemens Biograph mCT PET scanner

JK Poon, ML Dahlbom, ME Casey, J Qi, SR Cherry, RD Badawi

Physics in medicine & biology 60 (3), N35

302015

Study of a novel-geometry PET scanner

K Gong, Y Wu, F Daghighian, J Qi

Int. Meeting on Fully Three-Dimensional Image Reconstruction in Radiology …

32015

Edge-preserving PET image reconstruction using trust optimization transfer

G Wang, J Qi

IEEE transactions on medical imaging 34 (4), 930-939

222014

Fast and accurate detector module crystal blur and Mis-position error modeling for PET imaging

T Xia, H Du, W Wang, K Burr, J Zhou, K Balakrishnan, H Ye, X Niu, C Ji, ...

2014 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC …

12014

Evaluation of penalty design in penalized maximum-likelihood image reconstruction for lesion detection

L Yang, A Ferrero, RJ Hagge, RD Badawi, J Qi

Journal of Medical Imaging 1 (3), 035501-035501

52014

Fluorescence lifetime imaging and intravascular ultrasound: co-registration study using ex vivo human coronaries

D Gorpas, H Fatakdawala, J Bec, D Ma, DR Yankelevich, J Qi, L Marcu

IEEE transactions on medical imaging 34 (1), 156-166

162014

PET image reconstruction using kernel method

G Wang, J Qi

IEEE transactions on medical imaging 34 (1), 61-71

2022014

Feasibility Study of Micro-Dose Total-Body Dynamic PET Imaging Using the EXPLORER

X Zhang, J Zhou, G Wang, JK Poon, SR Cherry, J Qi

Imaging (cps/MBq) 1, 43,000

 2014

Anatomical-image aided PET reconstruction by the kernel method

W Hutchcroft, G Wang, J Qi

Journal of Nuclear Medicine 55 (supplement 1), 44-44

102014

Feasibility study of micro-dose total-body dynamic PET imaging using the EXPLORER scanner

X Zhang, J Zhou, G Wang, J Poon, S Cherry, R Badawi, J Qi

Journal of Nuclear Medicine 55 (supplement 1), 269-269

132014

Monte Carlo SURE-based regularization parameter selection for penalized-likelihood image reconstruction

J Zhou, J Qi

2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI), 1095-1098

22014

Bi-modal imaging of atherosclerotic plaques: Automated method for co-registration between fluorescence lifetime imaging and intravascular ultrasound data

D Gorpas, H Fatakdawala, J Bec, D Ma, DR Yankelevich, JW Bishop, J Qi, ...

Photonic Therapeutics and Diagnostics X 8926, 432-439

42014

Efficient fully 3D list-mode TOF PET image reconstruction using a factorized system matrix with an image domain resolution model

J Zhou, J Qi

Physics in Medicine & Biology 59 (3), 541

222014

Regularization design in penalized maximum-likelihood image reconstruction for lesion detection in 3D PET

L Yang, J Zhou, A Ferrero, RD Badawi, J Qi

Physics in Medicine & Biology 59 (2), 403

302013

Resolution modeling in PET imaging: theory, practice, benefits, and pitfalls

A Rahmim, J Qi, V Sossi

Medical physics 40 (6Part1), 064301

3822013

Direct estimation of kinetic parametric images for dynamic PET

G Wang, J Qi

Theranostics 3 (10), 802

1282013

Biomedical

L Yang, J Zhou, J Qi

12013

Validation of SimSET Monte Carlo simulations of the Siemens Biograph mCT PET scanner

JK Poon, ML Dahlbom, J Qi, S Cherry, R Badawi

2012 IEEE Nuclear Science Symposium and Medical Imaging Conference Record …

32012

In Vivo Quantification of Joint Inflammation in a Murine Arthritis Model by Anato-Molecular Imaging

SK Raychaudhuri, A Mitra, K Gong, J Zhou, J Qi, SP Raychaudhuri, ...

ARTHRITIS AND RHEUMATISM 64 (10), S146-S147

 2012

An optimization transfer algorithm for nonlinear parametric image reconstruction from dynamic PET data

G Wang, J Qi

IEEE transactions on medical imaging 31 (10), 1977-1988

832012

Penalized likelihood PET image reconstruction using patch-based edge-preserving regularization

G Wang, J Qi

IEEE transactions on medical imaging 31 (12), 2194-2204

1522012

Regularization design for breast lesion detection in penalized maximum likelihood image reconstruction

L Yang, J Zhou, J Qi

2012 9th IEEE International Symposium on Biomedical Imaging (ISBI), 626-629

72012

A prototype small-animal PET scanner dedicated to mouse brain imaging

Y Yang, J Bec, J Zhou, M Zhang, M Judenhofer, X Bai, K Shah, R Farrell, ...

Journal of Nuclear Medicine 53 (supplement 1), 488-488

32012

A novel method for fast and robust estimation of fluorescence decay dynamics using constrained least-squares deconvolution with Laguerre expansion

J Liu, Y Sun, J Qi, L Marcu

Physics in Medicine & Biology 57 (4), 843

1232012

High resolution PET with 250 micrometer LSO detectors and adaptive zoom

SR Cherry, J Qi

UNIVERSITY OF CALIFORNIA, DAVIS, CA

22012

Estimation of sinogram blurring matrix for Inveon microPET from point source scans

K Gong, J Zhou, M Tohme, J Qi

IEEE NSS-MIC

12012

PET image reconstruction with anatomical edge guided level set prior

J Cheng-Liao, J Qi

Physics in Medicine & Biology 56 (21), 6899

522011

Fast and efficient fully 3D PET image reconstruction using sparse system matrix factorization with GPU acceleration

J Zhou, J Qi

Physics in Medicine & Biology 56 (20), 6739

892011

Experimental assessment of resolution improvement of a zoom-in PET

J Qi, Y Yang, J Zhou, Y Wu, SR Cherry

Physics in Medicine & Biology 56 (17), N165

302011

Fully 3D PET image reconstruction with a 4D sinogram blurring kernel

MS Tohme, J Qi, J Zhou

22011

Statistical image reconstruction for hybrid fluorescence optical tomography and positron emission tomography

G Wang, C Li, SR Cherry, J Qi

2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro …

42011

Patch-based regularization for iterative PET image reconstruction

G Wang, J Qi

2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro …

102011

Fast iterative image reconstruction using sparse matrix factorization with GPU acceleration

J Zhou, J Qi

Medical Imaging 2011: Physics of Medical Imaging 7961, 168-174

22011

Tapered LSO arrays for small animal PET

Y Yongfeng, SS James, W Yibao, H Du, J Qi, SR Cherry, R Farrell, ...

Physics in Medicine and Biology 56

 2011

Tapered LSO arrays for small animal PET

Y Yang, SS James, Y Wu, H Du, J Qi, R Farrell, PA Dokhale, KS Shah, ...

Physics in Medicine & Biology 56 (1), 139

592010

Detection performance analysis for time-of-flight PET

N Cao, RH Huesman, WW Moses, J Qi

Physics in Medicine & Biology 55 (22), 6931

172010

Efficient system modeling of a high-resolution zoom-in PET scanner

J Zhou, J Qi

IEEE Nuclear Science Symposuim & Medical Imaging Conference, 3501-3505

42010

Segmentation of mouse dynamic PET images using a multiphase level set method

J Cheng-Liao, J Qi

Physics in Medicine & Biology 55 (21), 6549

332010

Iterative reconstruction of Fourier‐rebinned PET data using sinogram blurring function estimated from point source scans

MS Tohme, J Qi

Medical physics 37 (10), 5530-5540

52010

Adaptive imaging for lesion detection using a zoom-in PET system

J Zhou, J Qi

IEEE transactions on medical imaging 30 (1), 119-130

402010

Acceleration of the direct reconstruction of linear parametric images using nested algorithms

G Wang, J Qi

Physics in Medicine & Biology 55 (5), 1505

1052010

An imaging-driven model for liposomal stability and circulation

S Qin, JW Seo, H Zhang, J Qi, FRE Curry, KW Ferrara

Molecular pharmaceutics 7 (1), 12-21

452010

A residual correction method for high‐resolution PET reconstruction with application to on‐the‐fly Monte Carlo based model of positron range

L Fu, J Qi

Medical physics 37 (2), 704-713

272010

Simulation study of spatial resolution and sensitivity for the tapered depth of interaction PET detectors for small animal imaging

S St James, Y Yang, SL Bowen, J Qi, SR Cherry

Physics in Medicine & Biology 55 (2), N63

372009

Three-dimensional fluorescence optical tomography in small-animal imaging using simultaneous positron-emission-tomography priors

C Li, G Wang, J Qi, SR Cherry

Optics letters 34 (19), 2933-2935

522009

Initial characterization of a dedicated breast PET/CT scanner during human imaging

SL Bowen, Y Wu, AJ Chaudhari, L Fu, NJ Packard, GW Burkett, K Yang, ...

Journal of Nuclear Medicine 50 (9), 1401-1408

1382009

Statistical image reconstruction for muon tomography using a Gaussian scale mixture model

G Wang, L Schultz, J Qi

IEEE Transactions on Nuclear Science 56 (4), 2480-2486

302009

Theoretical analysis and simulation study of a high-resolution zoom-in PET system

J Zhou, J Qi

Physics in Medicine & Biology 54 (17), 5193

512009

High-resolution adaptive PET imaging

J Zhou, J Qi

International Conference on Information Processing in Medical Imaging, 26-37

22009

Direct reconstruction of dynamic PET parametric images using sparse spectral representation

G Wang, J Qi

2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro …

62009

PET characteristics of a dedicated breast PET/CT scanner prototype

Y Wu, SL Bowen, K Yang, N Packard, L Fu, G Burkett, J Qi, JM Boone, ...

Physics in Medicine & Biology 54 (13), 4273

782009

PET performance evaluation of an MR-compatible PET insert

Y Wu, C Catana, R Farrell, PA Dokhale, KS Shah, J Qi, SR Cherry

IEEE transactions on nuclear science 56 (3), 574-580

492009

Iterative image reconstruction for positron emission tomography based on a detector response function estimated from point source measurements

MS Tohme, J Qi

Physics in medicine & biology 54 (12), 3709

962009

Generalized algorithms for direct reconstruction of parametric images from dynamic PET data

G Wang, J Qi

IEEE transactions on medical imaging 28 (11), 1717-1726

1242009

Bayesian image reconstruction for improving detection performance of muon tomography

G Wang, LJ Schultz, J Qi

IEEE transactions on image processing 18 (5), 1080-1089

362009

Direct reconstruction of PET receptor binding parametric images using a simplified reference tissue model

G Wang, J Qi

Medical Imaging 2009: Physics of Medical Imaging 7258, 297-304

112009

Analysis of penalized likelihood image reconstruction for dynamic PET quantification

G Wang, J Qi

IEEE transactions on medical imaging 28 (4), 608-620

302009

Quantitative accuracy of penalized-likelihood reconstruction for ROI activity estimation

L Fu, JR Stickel, RD Badawi, J Qi

IEEE transactions on nuclear science 56 (1), 167-172

82009

Depth of interaction calibration for PET detectors with dual-ended readout by PSAPDs

Y Yang, J Qi, Y Wu, S St James, R Farrell, PA Dokhale, KS Shah, ...

Physics in Medicine & Biology 54 (2), 433

832008

A novel iterative image reconstruction method for high-resolution PET Imaging with a Monte Carlo based positron range model

L Fu, J Qi

2008 IEEE Nuclear Science Symposium Conference Record, 3609-3612

102008

A prototype PET scanner with DOI-encoding detectors

Y Yang, Y Wu, J Qi, SS James, H Du, PA Dokhale, KS Shah, R Farrell, ...

Journal of Nuclear Medicine 49 (7), 1132-1140

1372008

Iterative nonlinear least squares algorithms for direct reconstruction of parametric images from dynamic PET

G Wang, J Qi

2008 5th IEEE International Symposium on Biomedical Imaging: from Nano to …

162008

A residual correction method for iterative reconstruction with inaccurate system model

L Fu, J Qi

2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to …

52008

First human images from a dedicated breast PET/CT scanner

S Bowen, A Chaudhari, Y Wu, N Packard, G Burkett, L Fu, J Qi, J Boone, ...

Journal of Nuclear Medicine 49 (supplement 1), 25P-25P

22008

Dynamic imaging of arginine-rich heart-targeted vehicles in a mouse model

H Zhang, J Kusunose, A Kheirolomoom, JW Seo, J Qi, KD Watson, ...

Biomaterials 29 (12), 1976-1988

502008

Simultaneous in vivo positron emission tomography and magnetic resonance imaging

C Catana, D Procissi, Y Wu, MS Judenhofer, J Qi, BJ Pichler, RE Jacobs, ...

Proceedings of the National Academy of Sciences 105 (10), 3705-3710

3402008

Maximum a posteriori reconstruction of the Patlak parametric image from sinograms in dynamic PET

G Wang, L Fu, J Qi

Physics in Medicine & Biology 53 (3), 593

952008

Estimation of detector response function for PET from point source measurements: Effect of point source configuration

M Tohme, J Qi

2007 IEEE Nuclear Science Symposium Conference Record 6, 4422-4425

32007

Analysis of penalized likelihood reconstruction for PET kinetic quantification

G Wang, J Qi

2007 IEEE Nuclear Science Symposium Conference Record 5, 3283-3293

 2007

PET image reconstruction with anatomical prior using multiphase level set method

J Liao, J Qi

2007 IEEE Nuclear Science Symposium Conference Record 6, 4163-4168

52007

Pharmacokinetics of Encapsulated Paclitaxel: Multi-Probe Analysis With PET

MS Tartis, J Marik, A Kheirolomoom, RE Pollard, H Zhang, J Qi, ...

Summer Bioengineering Conference 47985, 113-114

 2007

High-resolution image reconstruction for PET using estimated detector response functions

MS Tohme, J Qi

Computational Imaging V 6498, 385-392

42007

Fabrication and characterization of a 0.5-mm lutetium oxyorthosilicate detector array for high-resolution PET applications

JR Stickel, J Qi, SR Cherry

Journal of Nuclear Medicine 48 (1), 115-121

942007

BASIC SCIENCE INVESTIGATIONS-Fabrication and Characterization of a 0.5-mm Lutetium Oxyorthosilicate Detector Array for High-Resolution PET Applications

JR Stickel, J Qi, SR Cherry

Journal of Nuclear Medicine 48 (1), 115-121

 2007

Simultaneous acquisition of multislice PET and MR images: initial results with a MR-compatible PET scanner

C Catana, Y Wu, MS Judenhofer, J Qi, BJ Pichler, SR Cherry

Journal of Nuclear Medicine 47 (12), 1968-1976

4692006

Characteristics of the PET component of a dedicated breast PET/CT scanner prototype

Y Wu, K Yang, N Packard, L Fu, J Stickel, VH Tran, J Qi, JM Boone, ...

2006 IEEE Nuclear Science Symposium Conference Record 4, 2335-2339

162006

Experimental evaluation of system models for PET with block detectors

MS Tohme, J Qi

2006 IEEE Nuclear Science Symposium Conference Record 5, 2778-2782

22006

Spatially penalized methods for linear parametric imaging in dynamic PET

G Wang, J Qi

2006 IEEE nuclear science symposium conference record 3, 1787-1791

32006

Evaluation of 2D ROI image reconstruction using ML-EM method from truncated projections

L Fu, J Liao, J Qi

2006 IEEE Nuclear Science Symposium Conference Record 4, 2236-2241

62006

A fast method for kinetic parameter estimation

IS Yetik, J Qi

2006 IEEE Nuclear Science Symposium Conference Record 6, 3213-3216

12006

Dynamic pet image segmentation using multiphase level set method

J Liao, J Qi

2006 IEEE Nuclear Science Symposium Conference Record 4, 2047-2052

22006

Initial results of a positron tomograph for prostate imaging

JS Huber, WS Choong, WW Moses, J Qi, J Hu, GC Wang, D Wilson, S Oh, ...

IEEE transactions on nuclear science 53 (5), 2653-2659

192006

Calculation of the sensitivity image in list-mode reconstruction for PET

J Qi

IEEE transactions on nuclear science 53 (5), 2746-2751

342006

Maximum-likelihood estimation of detector response for PET image reconstruction

J Qi

2006 International Conference of the IEEE Engineering in Medicine and …

62006

Penalized maximum-likelihood image reconstruction for lesion detection

J Qi, RH Huesman

Physics in Medicine & Biology 51 (16), 4017

402006

Iterative reconstruction techniques in emission computed tomography

J Qi, RM Leahy

Physics in Medicine & Biology 51 (15), R541

4822006

Characterization of the LBNL PEM camera

GC Wang, JS Huber, WW Moses, J Qi, WS Choong

IEEE transactions on nuclear science 53 (3), 1129-1135

692006

Theoretical study of penalized-likelihood image reconstruction for region of interest quantification

J Qi, H Huesman

IEEE transactions on medical imaging 25 (5), 640-648

412006

Prostate imaging with LBNL prostate-optimized positron emission tomograph

J Huber, W Moses, R Huesman, J Hu, J Qi, WS Choong, D Wilson, ...

Journal of Nuclear Medicine 47 (suppl 1), 395P-395P

 2006

A study of changes in glucose and fatty acid metabolism in the heart as a function of hypertrophy in SHR models using microPET and microSPECT technology

G Gullberg, J Hu, A Sitek, B Reutter, R Huesman, S Hanrahan, ...

Journal of Nuclear Medicine 47 (suppl 1), 72P-72P

12006

Rapamycin inhibits growth of premalignant and malignant mammary lesions in a mouse model of ductal carcinoma in situ

R Namba, LJT Young, CK Abbey, L Kim, P Damonte, AD Borowsky, J Qi, ...

Clinical Cancer Research 12 (8), 2613-2621

932006

Direct estimation of kinetic parameters from the sinogram with an unknown blood function

IS Yetik, J Qi

3rd IEEE International Symposium on Biomedical Imaging: Nano to Macro, 2006 …

212006

Investigation of lesion detectability in dynamic PET data sets

G Wang, J Qi

3rd IEEE International Symposium on Biomedical Imaging: Nano to Macro, 2006 …

12006

Preclinical testing of chemopreventive agents in a mouse model of DCIS

R Namba, A Borowsky, S Liu, R Enriquez, L Le, CK Abbey, J Qi, LJ Young, ...

CANCER RESEARCH 66 (8)

 2006

Comparison of statistical reconstructions with isotropic and anisotropic resolution in PET

J Qi

IEEE transactions on nuclear science 53 (1), 147-151

162006

Comparison of lesion detection and quantification in MAP reconstruction with Gaussian and non-Gaussian priors

J Qi

International Journal of Biomedical Imaging 2006

182006

A retrospective on the LBNL PEM project

JS Huber, WW Moses, GC Wang, SE Derenzo, RH Huesman, J Qi, ...

Physica Medica 21, 60-63

122006

Characterization of a PET camera optimized for prostate imaging

JS Huber, WS Choong, WW Moses, J Qi, J Hu, GC Wang, D Wilson, S Oh, ...

IEEE Nuclear Science Symposium Conference Record, 2005 3, 4 pp.-1559

142005

Investigation of lesion detection in map reconstruction with non-Gaussian priors

J Qi

IEEE Nuclear Science Symposium Conference Record, 2005 3, 5 pp.-1708

142005

Effect of errors in the system matrix on maximum a posteriori image reconstruction

J Qi, RH Huesman

Physics in Medicine & Biology 50 (14), 3297

602005

MAP image reconstruction for arbitrary geometry PET systems with application to a prostate-specific scanner

J Hu, J Qi, JS Huber, WW Moses, RH Huesman

Proceedings of International Meeting on Fully 3D Image Reconstruction in …

222005

An approximate short scan helical FDK cone beam algorithm based on nutating curved surfaces satisfying the Tuy's condition

J Hu, K Tam, J Qi

Medical physics 32 (6Part1), 1529-1536

142005

Septa design for a prostate specific PET camera

J Qi, JS Huber, RH Huesman, WW Moses, SE Derenzo, TF Budinger

IEEE transactions on nuclear science 52 (1), 107-113

122005

Statistical image reconstruction for lesion detection

J Qi

Conference Record of the Thirty-Eighth Asilomar Conference on Signals …

 2004

A short scan helical FDK cone beam algorithm based on surfaces satisfying the Tuy's condition

J Hu, K Tam, RH Johnson, J Qi

IEEE Symposium Conference Record Nuclear Science 2004. 5, 2760-2764

12004

Direct list mode reconstruction for motion compensation

RH Huesman, J Qi, D Samaras, Y Wang, L Yang, W Zhang, R Ferrieri, ...

IEEE Symposium Conference Record Nuclear Science 2004. 6, 3953-3955

82004

Effect of errors in the system matrix on iterative image reconstruction

J Qi, RH Huesman

IEEE Symposium Conference Record Nuclear Science 2004. 5, 2854-2858

102004

Evaluation of cardiac hypertrophy in spontaneously hypertensive rats using metabolic rate of glucose estimated from dynamic microPET image data

GT Gullberg, RH Huesman, J Qi, BW Reutter, A Sitek, Y Yang

42004

Optimization of a PET scanner design for prostate lesion detection

J Qi

The 26th Annual International Conference of the IEEE Engineering in Medicine …

12004

Accurate estimation of the Fisher information matrix for the PET image reconstruction problem

Q Li, E Asma, J Qi, JR Bading, RM Leahy

IEEE transactions on medical imaging 23 (9), 1057-1064

502004

Propagation of errors from the sensitivity image in list mode reconstruction

J Qi, RH Huesman

IEEE transactions on medical imaging 23 (9), 1094-1099

352004

Instrumentation optimization for positron emission mammography

WW Moses, J Qi

Nuclear Instruments and Methods in Physics Research Section A: Accelerators …

272004

Fast approach to evaluate MAP reconstruction for lesion detection and localization

J Qi, RH Huesman

Medical Imaging 2004: Image Perception, Observer Performance, and Technology …

162004

Maximum-lesion-detectability reconstruction using penalized maximum likelihood

J Qi, RH Huesman

2004 2nd IEEE International Symposium on Biomedical Imaging: Nano to Macro …

12004

Analysis of lesion detectability in Bayesian emission reconstruction with nonstationary object variability

J Qi

IEEE Transactions on Medical Imaging 23 (3), 321-329

562004

Wavelet crosstalk matrix and its application to assessment of shift-variant imaging systems

J Qi, RH Huesman

IEEE Transactions on Nuclear Science 51 (1), 123-129

72004

Tomographic reconstructions using map algorithms-application to the SPIDR mission

DN Ghosh Roy, K Wilton, TA Cook, S Chakrabarti, J Qi, GT Gullberg

12004

Statistical Image Reconstruction for Lesion

J Qi

Conference Record 38, 153

 2004

Effect of random and scatter fractions in variance reduction using time-of-flight information

JA Kimdon, J Qi, WW Moses

2003 IEEE Nuclear Science Symposium. Conference Record (IEEE Cat. No …

212003

Estimation of the parameter covariance matrix for a one-compartment cardiac perfusion model estimated from a dynamic sequence reconstructed using map iterative reconstruction …

GT Gullberg, RH Huesman, DNG Roy, J Qi, BW Reutter

2003 IEEE Nuclear Science Symposium. Conference Record (IEEE Cat. No …

62003

Noise propagation in iterative reconstruction algorithms with line searches

J Qi

2003 IEEE Nuclear Science Symposium. Conference Record (IEEE Cat. No …

132003

Development of the LBNL positron emission mammography camera

JS Huber, WS Choong, J Wang, JS Maltz, J Qi, E Mandelli, WW Moses

IEEE Transactions on Nuclear Science 50 (5), 1650-1653

352003

A unified noise analysis for iterative image estimation

J Qi

Physics in Medicine & Biology 48 (21), 3505

852003

Theoretical evaluation of the detectability of random lesions in Bayesian emission reconstruction

J Qi

Biennial International Conference on Information Processing in Medical …

162003

Optimization of Bayesian emission tomographic reconstruction for region-of-interest quantitation

J Qi

Computational Imaging 5016, 141-150

 2003

Comparison of different CT-based attenuation correction schemes for PET with respiratory motion.

J Qi, RH Huesman, BW Reutter

JOURNAL OF NUCLEAR MEDICINE 44 (5), 38P-38P

22003

Fundamental limits of positron emission mammography

WW Moses, J Qi

Nuclear Instruments and Methods in Physics Research Section A: Accelerators …

342003

The development of a compact positron tomograph for prostate imaging

JS Huber, J Qi, SE Derenzo, WW Moses, RH Huesman, TF Budinger

Lawrence Berkeley National Lab.(LBNL), Berkeley, CA (United States)

22002

Comparison of rectangular and dual-planar positron emission mammography scanners

J Qi, C Kuo, RH Huesman, GJ Klein, WW Moses, BW Reutter

IEEE Transactions on Nuclear Science 49 (5), 2089-2096

492002

Scatter correction for positron emission mammography

J Qi, RH Huesman

Physics in Medicine & Biology 47 (15), 2759

382002

Internet2-based 3D PET image reconstruction using a PC cluster

DW Shattuck, J Rapela, E Asma, A Chatzioannou, J Qi, RM Leahy

Physics in Medicine & Biology 47 (15), 2785

542002

List mode reconstruction for PET with motion compensation: a simulation study

J Qi, RH Huesman

Proceedings IEEE International Symposium on Biomedical Imaging, 413-416

732002

Correction of motion in PET using event-based rebinning method: Pitfall and solution.

J Qi, RH Huesman

Journal of Nuclear Medicine 43 (5), 146P-146P

162002

Spatiotemporal reconstruction of list-mode PET data

TE Nichols, J Qi, E Asma, RM Leahy

IEEE Transactions on Medical Imaging 21 (4), 396-404

2342002

Lesion detection and quantitation of positron emission mammography

J Qi, RH Huesman

2001 IEEE Nuclear Science Symposium Conference Record (Cat. No. 01CH37310) 4 …

52001

3-D reconstruction in PET cameras with irregular sampling and depth of interaction

PRG Virador, WW Moses, RH Huesman, J Qi

IEEE Transactions on Nuclear Science 48 (4), 1524-1529

172001

Optimization of PET system design for lesion detection

J Qi

IEEE Transactions on Nuclear Science 48 (4), 1470-1476

132001

Image properties of list-mode likelihood reconstruction for a rectangular positron emission mammograph with DOI measurements

J Qi, GJ Klein, RH Huesman

IEEE Transactions on Nuclear Science 48 (4), 1343-1349

142001

Theoretical study of lesion detectability of MAP reconstruction using computer observers

J Qi, RH Huesman

IEEE transactions on medical imaging 20 (8), 815-822

1012001

Conceptual design of a compact positron tomograph for prostate imaging

JS Huber, SE Derenzo, J Qi, WW Moses, RH Huesman, TF Budinger

IEEE Transactions on Nuclear Science 48 (4), 1506-1511

332001

Reconstruction Algorithms-Image Properties of List-Mode Likelihood Reconstruction for a Rectangular Positron Emission Mammograph With DOI Measurements

J Qi, GJ Klein, RH Huesman

IEEE Transactions on Nuclear Science 48 (4), 1343-1349

 2001

4D PET image reconstruction from list mode data

E Asma, TE Nichols, J Qi, RM Leahy

2000 IEEE Nuclear Science Symposium. Conference Record (Cat. No. 00CH37149 …

212000

Covariance approximation for fast and accurate computation of channelized Hotelling observer statistics

P Bonetto, J Qi, RM Leahy

IEEE Transactions on Nuclear Science 47 (4), 1567-1572

782000

Comparison of 3-D maximum a posteriori and filtered backprojection algorithms for high-resolution animal imaging with microPET

A Chatziioannou, J Qi, A Moore, A Annala, K Nguyen, R Leahy, ...

IEEE transactions on medical imaging 19 (5), 507-512

1292000

Resolution and noise properties of MAP reconstruction for fully 3-D PET

J Qi, RM Leahy

IEEE transactions on medical imaging 19 (5), 493-506

4112000

Lesion detectability of MAP reconstruction using computer observer: A theoretical study.

J Qi, RH Huesman

Journal of Nuclear Medicine 41 (5), 18P-19P

42000

List-mode maximum-likelihood reconstruction applied to positron emission mammography (PEM) with irregular sampling

RH Huesman, GJ Klein, WW Moses, J Qi, BW Reutter, PRG Virador

IEEE transactions on medical imaging 19 (5), 532-537

2082000

Statistical approaches in quantitative positron emission tomography

RM Leahy, J Qi

Statistics and Computing 10, 147-165

3052000

3D reconstruction in PET cameras with irregular sampling and depth of interaction

J Qi

2000 IEEE Nuclear Science Symposium Conference RecordIEEE Transactions on …

 2000

Positron Emission Tomography-List-Mode Maximum-Likelihood Reconstruction Applied to Positron Emission Mammography (PEM) with Irregular Sampling

RH Huesman, GJ Klein, WW Moses, J Qi, BW Reutter, PRG Virador

IEEE Transactions on Medical Imaging 19 (5), 532-537

 2000

Positron Emission Tomography-Comparison of 3-D Maximum a posteriori and Filtered Backprojection Algorithms for High-Resolution Animal Imaging with microPET

A Chatziioannou, J Qi, A Moore, A Annala, K Nguyen, R Leahy, ...

IEEE Transactions on Medical Imaging 19 (5), 507-512

 2000

ROC and localization ROC analyses of lesion detection in whole-body FDG PET: effects of acquisition mode, attenuation correction and reconstruction algorithm

TH Farquhar, J Llacer, CK Hoh, J Czernin, SS Gambhir, MA Seltzer, ...

Journal of Nuclear Medicine 40 (12), 2043-2052

711999

Fast computation of the covariance of MAP reconstructions of PET images

J Qi, RM Leahy

Medical Imaging 1999: Image Processing 3661, 344-355

231999

A theoretical study of the contrast recovery and variance of MAP reconstructions from PET data

J Qi, RM Leahy

IEEE transactions on medical imaging 18 (4), 293-305

1971999

BASIC SCIENCE INVESTIGATIONS-ROC and Localization ROC Analyses of Lesion Detection in Whole-Body FDG PET: Effects of Acquisition Mode, Attenuation Correction and Reconstruction …

TH Farquhar, J Llacer, CK Hoh, J Czernin, SS Gambhir, MA Seltzer, ...

Journal of Nuclear Medicine 40 (12), 2043-2052

 1999

Continuous time dynamic PET imaging using list mode data

TE Nichols, J Qi, RM Leahy

Information Processing in Medical Imaging: 16th International Conference …

431999

Signal and Image Processing Institute

RM Leahy, J Qi

 1998

USC-SIPI REPORT# 329

RM Leahy, J Qi

 1998

A theoretical study of the contrast recovery and variance of map reconstructions with applications to the selection of smoothing parameters

J Qi, RM Leahy

1998 IEEE Nuclear Science Symposium Conference Record. 1998 IEEE Nuclear …

41998

Study of lesion contrast recovery for statistical PET image reconstruction with accurate system models

CHL Hsu, J Qi

Medical Imaging 1998: Image Processing 3338, 437-446

 1998

Fully 3D Bayesian image reconstruction for the ECAT EXACT HR+

J Qi, RM Leahy, C Hsu, TH Farquhar, SR Cherry

IEEE Transactions on Nuclear Science 45 (3), 1096-1103

1851998

High-resolution 3D Bayesian image reconstruction using the microPET small-animal scanner

J Qi, RM Leahy, SR Cherry, A Chatziioannou, TH Farquhar

Physics in medicine & biology 43 (4), 1001

7441998

Bayesian image estimation for fully three-D positron emission tomography

J Qi

University of Southern California

31998

Fully 3D Bayesian image reconstruction for the ECAT EXACT HR+

J Qi, RM Leahy, C Hsu, TH Farquhar, SR Cherry

1997 IEEE Nuclear Science Symposium Conference Record 2, 953-957

31997

Approximate maximum likelihood hyperparameter estimation for Gibbs priors

Z Zhou, RN Leahy, J Qi

IEEE transactions on image processing 6 (6), 844-861

1851997

An assessment on the wideband and narrowband methods of ultrasonic blood flow measurements

J Qi, S Gao, F Yang

ACTA ACUSTICA-PEKING- 22, 255-267

11997

Theoretical study of the benefit of long axial field-of-view PET on region of interest quantification Theoretical study of the benefit of long axial field-of-view PET on region …

X Zhang, RD Badawi, SR Cherry, J Qi

IOP Publishing

  

Anatomically aided PET image reconstruction using deep

Z Xie, T Li, X Zhang, W Qi, E Asma, J Qi

  

Internet-based 3D PET Image Reconstruction using

ABPC Cluster, D Shattuck, J Rapela, E Asma, A Chatziioannou, J Qi, ...

  

Image properties of list mode likelihood reconstruction for a rectangular positron emission

J Qi, GJ Klein, RH Huesman

Info:

  

Comparison of 3D Maximum A Posteriori and Filtered Backprojection algorithms for high resolution

A Chatziioannou, J Qi, A Moore, A Annala, K Nguyen, RM Leahy, ...

Info:

  

Sinogram Blurring Matrix Estimation from Point Sources Measurements with Rank-One Approximation

K Gong, J Zhou, J Qi